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IC 2025 Weekly Distance Learning Modules
Oct 28-Nov 1, 2024
Week 1: Fundamentals of Genetics
Module Objectives
Basic Genetics Primer, Part 1
Objectives
- Describe the basic principles of gene structure, function, and regulation
- Appreciate the nature and consequences of major types of gene mutations
Basic Genetics Primer, Part 2
Objectives
- Outline the principles of Mendelian inheritance
- Identify the features of incomplete penetrance and variable expressivity
- Recognize how genetic mechanisms such as de novo mutations, mosaicism and imprinting can affect the pattern of cancer in a family
The Basic Science of Cancer Genetics
Objectives
- Distinguish the differences between somatic and germline gene mutations
- Describe the roles of oncogenes and tumor suppressor genes in signal transduction and cell cycle control
- Review the mechanisms of DNA damage
Nov 4-8, 2024
Week 2: Essential Components of the GCRA Practice
Module Objectives
The Fundamentals of GCRA
Objectives
- Describe fundamentals of the genetic cancer risk assessment (GCRA) process
- Take a comprehensive cancer family history
- Explain the importance of and strategies for confirming key cancers
- Identify sporadic, familial, and hereditary cancer patterns
Documenting the Cancer Family History and the Fundamentals of GCRA
Objectives
- Recognize the importance of eliciting, documenting and verifying the patient family history
- Collect family history information, focusing on details and questions relevant to cancer history documentation
- Draw a 3-4 generation pedigree using standard pedigree nomenclature and symbols
- Identify questionable or incomplete information that will need further verification to assess cancer risk in the family
- Demonstrate skills associated with proficiency in collecting and documenting the family history of cancers
Reading the Pathology Report through the Genomics Lens
Objectives
- Demonstrate ability to read and interpret pathology reports
- Extract information on primary site, histologic and molecular features from pathology reports and clinical documentation
- Apply information from pathologic confirmation of tumor characteristics to the genetic cancer risk assessment process
Nov 11-15, 2024
Week 3: Genetic/Genomic Testing
Module Objectives
Variant Nomenclature: Reading and Interpreting Genetic Test Results
Objectives
- Recognize various types of genetic variants
- Distinguish between different types of variant nomenclature
- Interpret a genetic test report
Characterization and Clinical Interpretation of Germline Genomic Variants
Objectives
- Review types of genetic variants
- Outline the categories of variant classification established by the ACMG
- Describe the methods, resources, and tools used to classify variants
- Discuss approaches to re-classifying variants of uncertain significance (VUS)
Laboratory Methods for Inherited Cancer Susceptibilities
Objectives
- Identify the methods, benefits, and limitations of different types of NGS cancer panels
- Recognize approaches to variant interpretation and reporting
- Apply different types of genetic tests to clinical vignettes
Nov 18-22, 2024
Week 4: Hereditary Breast and Ovarian Cancer Syndromes Part 1
Module Objectives
Hereditary Breast and Ovarian Cancer Syndromes
Objectives
- Recognize features of high-penetrance hereditary breast/breast and ovarian cancer syndromes
- Describe the established and emerging genetic etiologies of breast and ovarian cancer
- Review the impact of founder mutations associated with BRCA 1 & 2 hereditary breast and ovarian cancer
- Examine the benefits and limitations of genetic analysis and risk management for hereditary breast/breast ovarian cancer
Hereditary Breast/Ovarian Cancer Syndromes: Moderate Risk Genes
Objectives
- Describe the differences between high, moderate, and low penetrance cancer susceptibility genes.
- Recognize that cancer susceptibility genes on clinical panels are not always actionable.
- Identify the benefits and limitations in including moderate and low penetrance cancer susceptibility genes in clinical multi gene testing panels.
Hereditary Breast/Ovarian Cancer Risk Assessment
Objectives
- Apply mutation probability and empiric risk assessment models for breast cancer
- Formulate an evaluation & management plan
Dec 2-6, 2024
Week 5: Hereditary Breast and Ovarian Cancer Syndromes Part 2
Module Objectives
Clinical Management of Hereditary Breast Cancers
Objectives
- Review the tools for high-risk breast and ovarian cancer screening
- Identify the role and efficacy of breast and ovarian cancer surgical risk reduction
- Recognize the role of chemoprevention options for breast and ovarian cancer risk reduction
- Use evidence-based guidelines to inform risk management recommendations for patients with pathogenic variants in high or moderate penetrance breast and ovarian cancer susceptibility genes
- Apply individualized screening and risk management options and recommendations to case examples
HBOC Clinical Management and Precision Medicine: Evidence-based Updates, Part 1
Objectives
- Describe the methods and efficacy of breast and ovarian cancer screening tools
- Describe the methods and efficacy of breast and ovarian cancer surgical risk reduction
- Review the NCCN guidelines for high-risk cancer screening and management
- Recognize the timing of GCRA and impact on surgical decisions
- Discuss targeted treatment options for patients with germline HRD mutations
HBOC Clinical Management and Precision Medicine: Evidence-based Updates, Part 2 Chemoprevention
Objectives
- Identify tools and strategies for personalized on-surgical breast cancer risk reduction
- Describe the benefits and risks of chemopreventive risk reduction strategies and appropriateness for age, life phase and risk level
- Review evidence related to lifestyle interventions to reduce breast cancer risk (diet, exercise, etc.)
- Recognize approaches for testing new interventions for breast cancer risk reduction.
Dec 9-13, 2024
Week 6: Hereditary Gastrointestinal Syndromes Part 1
Module Objectives
Hereditary Gastrointestinal Cancer Syndromes, Lynch Syndrome
Objectives
- Recognize the features of hereditary gastrointestinal and other cancers associated with Lynch Syndrome
- Discuss the methods and limitations of tumor screening for Lynch syndrome
- Identify the features and mode of inheritance of Constitutional Mismatch Repair Deficiency (CMMRD)
- Recognize the characteristics of Familial Colorectal Cancer Type X
Significance and Practical Applications for Tumor Phenotyping (IHC/MSI) in Hereditary Cancer Risk Assessment
Objectives
- Review the mismatch repair (MMR) mechanism and the association of MMR deficiency in Lynch syndrome
- Recognize the importance of universal MSI/IHC tumor screening on newly diagnosed colorectal and endometrial cancers
- Review EGAPP recommendations Utilize MSI/IHC screening results for risk assessment in clinical cases
- Utilize MSI/IHC screening results for risk assessment in clinical cases
Dec 16-20, 2024
Week 7: Hereditary Gastrointestinal Syndromes Part 2
Module Objectives
Hereditary Gastrointestinal Cancer Syndromes, Polyposis
Objectives
- Identify the features distinguishing different hereditary polyposis syndromes
- Recognize the association between polyp histology and potential germline genetic predisposition to a polyposis syndrome
- Discern the features of different polyposis syndromes, including: Familial adenomatous polyposis; MutYH-associated polyposis; Hamartomatous polyposis syndromes; Serrated polyposis syndrome
Hereditary Gastrointestinal Cancer Syndromes, Gastric Pancreatic
Objectives
- Recognize the features of hereditary gastric cancers
- Recognize the features of hereditary pancreatic cancers
- Apply appropriate germline genetic testing strategies for hereditary gastrointestinal syndromes
Jan 6-10, 2025
Week 8: Pediatric and Hematologic Syndromes
Module Overview
Pediatric Cancer Syndromes: Management
Objectives
- Recognize clinical features of hereditary cancer syndromes with pediatric manifestations
- Recognize the conditions under which a pediatric cancer patient should be referred to Clinical Genetics
- Provide education on hereditary cancer syndromes with pediatric manifestations to parents, patients and providers in age appropriate manner
Pediatric Cancer Syndromes: Counseling Issues
Objectives
- Identify genetic counseling and testing issues associated with pediatric hereditary cancer syndromes
- Recognize limitations and benefits of different testing strategies
- Describe psychosocial impacts of genetic testing for children
Hereditary Hematologic Cancer Syndromes
Objectives
- Identify key terminology and basics of hematologic disorder and malignancy subtypes
- Recognize how hematologic disorders can affect tissue selection and genetic test interpretation
- Review the current rationale, care impact, and guidelines for germline genetic evaluation for patients with hematologic disorders and cancers
- Identify patterns suggestive of hereditary hematologic malignancy disorders and expected yields of germline testing
Jan 13-17, 2025
Week 9: Genodermatoses and Melanoma Cancer Syndromes
Module Overview
Hereditary Genodermatoses
Objectives
- Define disease characteristics of hereditary syndromes classified as genodermatoses
- Identify the genes associated with hereditary syndromes that have cutaneous manifestations
- Recognize cancer risks associated with hereditary genodermatoses syndromes
Hereditary Melanoma
Objectives
- Identify characteristics of hereditary melanoma and when to consider genetic testing
- Recognize the genes associated with hereditary melanoma
- Discuss clinical characteristics associated with CDKN2A gene and management recommendations
Jan 20-24, 2025
Week 10: Hereditary Endocrine and Genitourinary Cancer Syndromes
Module Overview
Hereditary Endocrine Neoplasias
Objectives
- Recognize clinical features of hereditary endocrine neoplasia syndromes
- Appreciate risks, benefits, and limitations of genetic testing
- Identify resources to inform risk management for individuals with hereditary endocrine neoplasias
Genitourinary Cancer Syndromes
Objectives
- Recognize inherited urologic disorders associated with kidney cancer
- Distinguish renal tumor pathologies associated with several inherited kidney cancer syndromes
- Identify appropriate kidney cancer patients for genetic counseling and testing
Hereditary Prostate Cancer
Objectives
- Describe the genetic etiologies of hereditary prostate cancer
- Recognize features warranting genomic evaluation associated with prostate cancer
- Explain the methods and limitations of genetic analysis for hereditary prostate cancer
Jan 27-31, 2025
Week 11: Tumor/Germline Testing; Understanding and Interpreting Clonal Hematopoiesis
Module Overview
Tumor/Germline Analysis in GCRA Practice, Part 1
Objectives
- Identify the distinctions between the etiologies of germline and somatic genetics
- Review considerations prior to ordering germline and somatic genomic testing
- Discuss challenges in interpreting somatic testing results
- Recognize confounding somatic phenomena that can be captured in germline testing
Tumor/Germline Analysis in GCRA Practice, Part 2
Objectives
- Compare the benefits and challenges of somatic panel, germline panel and paired somatic/germline sequencing
- Identify issues related to incidental findings in cancer sequencing.
- Discriminate strategies used to interpret genomic data
- Examine ways that genomic data are changing cancer treatment paradigms
- Discuss some of the patient, provider, and system-level challenges to genomic test integration
Navigating Complex Genetic Test Results - Clonal Hematopoiesis
Objectives
- Review the various possible mechanisms of both germline and somatic mosaicism
- Identify the various mechanisms that can be associated with an altered allelic fraction in a germline genetic test
- Discuss approaches to interpreting, further evaluating and following up on genetic test results reporting low allelic fractions
Feb 3-7, 2025
Week 12: Ethical, Legal and Social Implications; Psychosocial and Family Dynamics
Module Overview
Ethical, Legal, and Social Issues in Cancer Genetics
Objectives
- Recognize ethical, legal and social issues relevant to cancer genetics counseling and testing
- Apply bioethical principles to counseling challenges
- Identify emerging legislation protecting against genetic discrimination
Psychosocial and Family Dynamics of Hereditary Cancers
Objectives
- Recognize key psychological principles and how they generalize across hereditary cancer syndromes
- Discuss how psychological factors may interact with specific features of hereditary risk
- Review how these processes may effect emotional adjustment, decision-making, quality of life
- Identify family- and individual-level challenges commonly encountered in working with familial risk patients
- Review brief assessments and tools that can be incorporated into cancer risk consultations Identify red flags that indicate consideration of referral for psychological support
Feb 10-14, 2025
Week 13: GCRA Counseling Strategies
Module Overview
Cancer Risk Assessment Counseling Strategies
Objectives
- Observe the application of cancer risk assessment and counseling skills in the setting of mock initial and follow up GCRA consultation sessions
- Recognize the key elements of a comprehensive GCRA counseling process
- Review the essential components of the informed consent process for genetic testing
- Identify how to address ethical, legal and social issues with patients and families
- Recognize key issues related to genetic test results interpretation, disclosure and communication of personalized risk management recommendations
Disclaimer: The information provided through this program is for educational purposes only. It is not intended to be a substitute for professional medical advice, diagnosis or treatment. Health care providers must exercise their own professional judgment in their clinical practice.
The Intensive Course in Cancer Risk Assessment is supported in part by funding from the National Cancer Institute of the National Institutes of Health under award numbers R25 CA112486 and R25 CA171998
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